Mac Daddy Mac n' Cheese

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2 shallots, peeled

3 cloves garlic

1 teaspoon olive oil

3 pieces bacon, diced, cooked, reserving 1 tablespoon bacon fat

2 tablespoons flour

4 cups heavy cream

1 teaspoon chopped fresh thyme

1 cup shredded Pepper Jack cheese

2 cups shredded Cheddar cheese

Salt and freshly ground black pepper

1 pound penne pasta, cooked

1/2 cup Panko bread crumbs

2 tablespoons melted butter

2 tablespoons chopped fresh parsley